genometools ☆
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Description:
Versatile open source genome analysis software
Type: Formula  |  Latest Version: 1.6.6@0  |  Tracked Since: Oct 19, 2025
Links: Homepage  |  formulae.brew.sh
Category: Other
Tags: genomics bioinformatics genome-analysis sequence-processing scientific-computing
Install: brew install genometools
About:
GenomeTools is a comprehensive software package for analyzing genome data. It provides a robust set of tools for processing, filtering, and annotating genomic sequences. Its main value proposition is offering a versatile and efficient solution for complex bioinformatics workflows.
Key Features:
  • Comprehensive toolkit for sequence and annotation processing
  • Efficient handling of large-scale genomic data
  • Support for various standard file formats (GFF, FASTA, etc.)
  • Scriptable via the GenomeTools scripting interface
Use Cases:
  • Genome assembly and annotation
  • RNA-seq data analysis and processing
  • Comparative genomics research
Alternatives:
  • bedtools – Bedtools is highly optimized for intersecting genomic features, while GenomeTools offers a broader suite for general genome manipulation and analysis.
  • SAMtools – SAMtools specializes in handling aligned sequencing data (SAM/BAM), whereas GenomeTools focuses more on genome annotations and feature manipulation.
Version History
Detected Version Rev Change Commit
Oct 19, 2025 12:40pm 0 VERSION_BUMP 050288f0
Sep 15, 2025 12:01am 0 VERSION_BUMP 9762755f
Oct 12, 2024 5:27am 0 VERSION_BUMP 580958bb
Oct 11, 2024 9:26pm 0 VERSION_BUMP 4cf65fd5
Sep 14, 2024 5:37am 0 VERSION_BUMP aa8543cd
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