unipro-ugene ☆
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Description:
Free open-source cross-platform bioinformatics software
Type: Cask  |  Latest Version: 53.1@0  |  Tracked Since: Dec 28, 2025
Links: Homepage  |  formulae.brew.sh
Category: Other
Tags: bioinformatics genomics scientific-computing biology data-analysis
Install: brew install --cask unipro-ugene
About:
UGENE is a comprehensive bioinformatics toolkit that integrates popular algorithms and tools for analyzing biological data. It provides a user-friendly graphical interface for complex tasks like genome assembly, protein structure analysis, and NGS data processing. The software is designed to run on Windows, macOS, and Linux, leveraging multi-core processors for high performance.
Key Features:
  • Integrated GUI for workflow design and visualization
  • Supports NGS data analysis (NGS, RNA-Seq, ChIP-Seq)
  • Includes tools for molecular modeling and protein structure prediction
  • Built-in support for popular algorithms like Smith-Waterman, ClustalW, and BLAST
Use Cases:
  • Genome assembly and annotation
  • Protein structure modeling and analysis
  • Next-generation sequencing (NGS) data processing
Alternatives:
  • Galaxy – Web-based platform vs Ugene's desktop application; Galaxy is more extensible via plugins but requires server setup.
  • Bioconductor – R-based statistical environment vs Ugene's GUI; Bioconductor is preferred for custom scripting and statistical analysis.
Version History
Detected Version Rev Change Commit
Mar 4, 2026 5:09am 53.1 0 VERSION_BUMP 03ab3265
Sep 15, 2025 1:18pm 52.1 0 VERSION_BUMP 7b6d39c1
Jun 30, 2024 12:05pm 50.0 0 VERSION_BUMP f2ce1cde
Nov 26, 2023 3:20pm 49.1 0 VERSION_BUMP 71d007aa
Nov 8, 2023 1:31pm 49.0 0 VERSION_BUMP 1521c552
Sep 4, 2023 7:30pm 48.1 0 VERSION_BUMP 35475093
Mar 11, 2023 5:47am 46.0 0 VERSION_BUMP 18254ef4
Jan 2, 2023 6:08am 45.1 0 VERSION_BUMP f73e3c12
Nov 19, 2022 10:58pm 45.0 0 VERSION_BUMP d627cbe4
Aug 21, 2022 8:05am 44.0 0 VERSION_BUMP e4f4c98c
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