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| Package |
Description |
Version |
|
blast
☆
formula
|
Basic Local Alignment Search Tool |
2.17.0 |
|
diamond
☆
formula
|
Accelerated BLAST compatible local sequence aligner |
2.1.16 |
|
jalview
☆
cask
|
Multiple sequence alignment editor, visualiser, analysis and figure generator |
2.11.5.1 |
|
mafft
☆
formula
|
Multiple alignments with fast Fourier transforms |
|
|
minigraph
☆
formula
|
Proof-of-concept seq-to-graph mapper and graph generator |
|
|
mmseqs2
☆
formula
|
Software suite for very fast sequence search and clustering |
18-8cc5c |
|
skani
☆
formula
|
Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs |
|