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Related:
bioinformatics
genomics
cli
sequencing
scientific-computing
sequence-analysis
simd
c-library
dna-sequencing
genetics
|
| Package |
Description |
Version |
|
abpoa
☆
formula
|
SIMD-based C library for fast partial order alignment using adaptive band |
1.5.5 |
|
bowtie2
☆
formula
|
Fast and sensitive gapped read aligner |
2.5.4 |
|
bwa
☆
formula
|
Burrow-Wheeler Aligner for pairwise alignment of DNA |
0.7.19 |
|
fastga
☆
formula
|
Pairwise whole genome aligner |
1.3.1 |
|
kalign
☆
formula
|
Fast multiple sequence alignment program for biological sequences |
|
|
lastz
☆
formula
|
Pairwise aligner for DNA sequences |
|
|
minimap2
☆
formula
|
Versatile pairwise aligner for genomic and spliced nucleotide sequences |
|
|
miniprot
☆
formula
|
Align proteins to genomes with splicing and frameshift |
|
|
mummer
☆
formula
|
Genome alignment tool |
|
|
rna-star
☆
formula
|
RNA-seq aligner |
2.7.11b |
|
trimal
☆
formula
|
Automated alignment trimming in large-scale phylogenetic analyses |
|
|
wfa2-lib
☆
formula
|
Wavefront alignment algorithm library v2 |
|